My R session (within RStudio) hangs up after using ggplotly().
For testing, I use one of the examples of ?ggplotly. The example normally works ok once or twice, but the R session hangs up after several tries (in the example below, the 2nd run hung up the session). I cannot even close the RStudio from the GUI and have to use the System Monitor application to kill it.
This problem arises when I run the following code after I have loaded a given project, not
if I start a R session with no project. But the project does not load any data or package, so do not know how to identify the problem.
This is what I specifically do:
I have found that loading package TSclust is the problem:
require(ggplot2)
require(plotly)
data(canada.cities, package = "maps")
viz <- ggplot(canada.cities, aes(long, lat)) +
borders(regions = "canada") +
coord_equal() +
geom_point(aes(text = name, size = pop), colour = "red", alpha = 1/2)
ggplotly(viz, tooltip = c("text", "size"))
#check that works
#clear all Viewer panes with the button
require(TSclust)
ggplotly(viz, tooltip = c("text", "size"))
#no View and R hangs up
> sessionInfo()
R version 4.1.2 (2021-11-01)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: Pop!_OS 22.04 LTS
Matrix products: default
BLAS: /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so.3
LAPACK: /usr/lib/x86_64-linux-gnu/openblas-pthread/libopenblasp-r0.3.20.so
locale:
[1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C LC_TIME=es_ES.UTF-8 LC_COLLATE=en_US.UTF-8 LC_MONETARY=es_ES.UTF-8 LC_MESSAGES=en_US.UTF-8
[7] LC_PAPER=es_ES.UTF-8 LC_NAME=C LC_ADDRESS=C LC_TELEPHONE=C LC_MEASUREMENT=es_ES.UTF-8 LC_IDENTIFICATION=C
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] TSclust_1.3.1 cluster_2.1.2 pdc_1.0.3 plotly_4.10.3 ggplot2_3.4.4
loaded via a namespace (and not attached):
[1] rgl_1.2.1 Rcpp_1.0.11 lattice_0.20-45 tidyr_1.3.0 class_7.3-20 zoo_1.8-12 digest_0.6.33
[8] lmtest_0.9-40 utf8_1.2.3 R6_2.5.1 httr_1.4.7 pillar_1.9.0 rlang_1.1.1 lazyeval_0.2.2
[15] curl_5.1.0 misc3d_0.9-1 rstudioapi_0.15.0 data.table_1.14.8 fracdiff_1.5-2 TTR_0.24.3 labeling_0.4.3
[22] htmlwidgets_1.6.2 munsell_0.5.0 proxy_0.4-27 compiler_4.1.2 xfun_0.40 pkgconfig_2.0.3 base64enc_0.1-3
[29] forecast_8.21.1 urca_1.3-3 htmltools_0.5.6.1 tcltk_4.1.2 nnet_7.3-17 tidyselect_1.2.0 tibble_3.2.1
[36] quadprog_1.5-8 dtw_1.23-1 fansi_1.0.5 viridisLite_0.4.2 dplyr_1.1.3 withr_2.5.1 grid_4.1.2
[43] nlme_3.1-155 jsonlite_1.8.7 gtable_0.3.4 lifecycle_1.0.3 magrittr_2.0.3 scales_1.2.1 KernSmooth_2.23-20
[50] quantmod_0.4.25 cli_3.6.1 longitudinalData_2.4.5 tseries_0.10-54 timeDate_4022.108 ellipsis_0.3.2 xts_0.13.1
[57] generics_0.1.3 vctrs_0.6.4 tools_4.1.2 glue_1.6.2 purrr_1.0.2 clv_0.3-2.4 maps_3.4.1.1
[64] crosstalk_1.2.0 parallel_4.1.2 fastmap_1.1.1 yaml_2.3.7 colorspace_2.1-0 locpol_0.8.0 knitr_1.44