Is it possible to run sbatch in input blocking mode? I have sbatch called via another controller script. Before going to the next step in the controller script I want to make sure the submitted job is completed and the results of the job are available. What alternatives could be considered? Thank you!
is it possible to run sbatch in blocking mode?
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The
sbatchcommand has the-Woption. From the sbatch manpage:Otherwise, you can use job dependencies. You can submit a job, and then submit another one with
--dependency=after_ok:<the job id of the first job>so Slurm will only start the second one after the first one has run properly.That process can be automated with a workflow management system. See this for more information.