Git submodule now listed as untracked

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I have a project with two submodules which I got from other people. I made modifications in both, but only one gets reported as modified and can therefore be staged for committing. The other one is in the "Untracked files" section. What did I break ? Both the .gitmodules files and the .git/config file contain the same information about both submodules (name, origin repo, etc ...). What other information must I provide ? Where else are submodules referenced by git ?

Thanks in advance.

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