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How to draw dendrogram using ape package in R?

score 561 · Answer 1 · 2017-09-07T11:56:40.720000

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561

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How to draw dendrogram using ape package in R?

561 views Asked by Lakshmi KrishnaKumaar At 07 September 2017 at 11:56

score 557 · Answer 2 · 2017-09-13T16:40:57.977000

Skipping slow tasks in a loop in R

557 views Asked by Greg Owens At 13 September 2017 at 16:40

score 3411 · Answer 3 · 2014-12-14T22:55:43.443000

Node labels on circular phylogenetic tree

3.4k views Asked by Vis At 14 December 2014 at 22:55

score 102 · Answer 4 · 2023-11-15T13:13:20.687000

Phangorn's nnls.tree fails with some trees in R

102 views Asked by Matías Guzmán Naranjo At 15 November 2023 at 13:13

score 3744 · Answer 5 · 2018-11-04T17:15:46.510000

rename phylo tip labels

3.7k views Asked by AudioBubble At 04 November 2018 at 17:15

score 1108 · Answer 6 · 2018-11-26T18:07:43.073000

Setting the edge.lenth in a phylo object using a variable in a data.frame

1.1k views Asked by Erling Lundevaller At 26 November 2018 at 18:07

score 8533 · Answer 7 · 2014-01-14T12:30:27.153000

How to use as.DNAbin{ape} with DNA sequences stored in a dataframe?

8.5k views Asked by A.Mstt At 14 January 2014 at 12:30

score 121 · Answer 8 · 2016-02-12T16:25:02.477000

Error in "birthdeath" function (phylogenetic tree analysis)

121 views Asked by Robert At 12 February 2016 at 16:25

score 1150 · Answer 9 · 2020-07-27T18:40:27.987000

Trying to write data into newick format R

1.1k views Asked by Angie At 27 July 2020 at 18:40

score 2096 · Answer 10 · 2020-07-28T16:08:33.703000

Error running PGLS in ape: "no covariate specified"

2k views Asked by Mariah Donohue At 28 July 2020 at 16:08

score 600 · Answer 11 · 2014-06-04T05:23:50.160000

Mulitprocessing and rpy2 (with ape)

600 views Asked by Chris F. At 04 June 2014 at 05:23

score 135 · Answer 12 · 2021-02-10T11:41:21.640000

Circular phylogeny names cut

135 views Asked by Jasmine At 10 February 2021 at 11:41

score 167 · Answer 13 · 2022-11-17T21:30:34.030000

How do I fix my tree after dropping tip on a phylogenetic tree :0 character label?

167 views Asked by Diego Olivo At 17 November 2022 at 21:30

score 1004 · Answer 14 · 2017-05-16T16:09:09.097000

Coloured lines for tangelgram - package ape function cophyloplot

1k views Asked by AudileF At 16 May 2017 at 16:09

score 273 · Answer 15 · 2017-05-18T12:36:33.887000

Specifying colours in phylogenetic ancestral state reconstruction

273 views Asked by SamPassmore At 18 May 2017 at 12:36

score 375 · Answer 16 · 2015-08-10T16:54:53.797000

Loop or Vectorize this function for Phylogenetic Tree Clade Dropping

375 views Asked by branch.lizard At 10 August 2015 at 16:54

score 72 · Answer 17 · 2018-08-11T23:09:44.087000

I want to be able to manipulate objects in class 'phylo' - ie. round/ turn my bootstrap values from decimals (.998) into percentages (99%)

72 views Asked by Kirsten Isabel At 11 August 2018 at 23:09

score 761 · Answer 18 · 2015-05-28T16:27:31.790000

floating.pie error while using nodelables from ape package

761 views Asked by user6385 At 28 May 2015 at 16:27

score 1897 · Answer 19 · 2013-07-22T23:01:16.930000

Combine phylogenetic tree with x,y graph

1.8k views Asked by user2055130 At 22 July 2013 at 23:01

score 202 · Answer 20 · 2021-09-15T06:07:54.307000

Ancestral state reconstruction, polytomies and the absence of branch lengths

202 views Asked by Diego Almeida-Silva At 15 September 2021 at 06:07

TechQA.

List Question

How to draw dendrogram using ape package in R?

Skipping slow tasks in a loop in R

Node labels on circular phylogenetic tree

Phangorn's nnls.tree fails with some trees in R

rename phylo tip labels

Setting the edge.lenth in a phylo object using a variable in a data.frame

How to use as.DNAbin{ape} with DNA sequences stored in a dataframe?

Error in "birthdeath" function (phylogenetic tree analysis)

Trying to write data into newick format R

Error running PGLS in ape: "no covariate specified"

Mulitprocessing and rpy2 (with ape)

Circular phylogeny names cut

How do I fix my tree after dropping tip on a phylogenetic tree :0 character label?

Coloured lines for tangelgram - package ape function cophyloplot

Specifying colours in phylogenetic ancestral state reconstruction

Loop or Vectorize this function for Phylogenetic Tree Clade Dropping

I want to be able to manipulate objects in class 'phylo' - ie. round/ turn my bootstrap values from decimals (.998) into percentages (99%)

floating.pie error while using nodelables from ape package

Combine phylogenetic tree with x,y graph

Ancestral state reconstruction, polytomies and the absence of branch lengths

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