Is it possible to have two applications App-1 and App-2, one runs on OS-1 another on OS-2. App-1 serialises/deserialises data with nanopb and communicates with App-2. App-2 serialises/deserialises data with google protobuf and communicates with App-1.
Using nanopb and protobuf for serialisation/deserialisation together in applications
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Yes. That's a major point of protobuf, being able to communicate with implementations in different languages. All protobuf libraries should be compatible with each other.
The specific case of nanopb vs. Google's C++ protobuf library is checked by nanopb
alltypestest case, and the binary output is byte-for-byte equal for the two libraries.