I am a new user of MVAPICH2, and I encountered troubles when I started with it.
First, I think I have installed it successfully, through this:
./configure --disable-fortran --enable-cuda
make -j 4
make install
There were not errors.
But when I attempted to run the example of cpi in the directory of example, I encountered like this:
I could connect node gpu-cluster-1 and gpu-cluster-4 through ssh without password;
I run the cpi example separately on gpu-cluster-1 and gpu-cluster-4 using mpirun_rsh, and it worked OK, just like this:
run@gpu-cluster-1:~/mvapich2-2.1rc1/examples$ mpirun_rsh -ssh -np 2 gpu-cluster-1 gpu-cluster-1 ./cpi
Process 0 of 2 is on gpu-cluster-1
Process 1 of 2 is on gpu-cluster-1
pi is approximately 3.1415926544231318, Error is 0.0000000008333387
wall clock time = 0.000089
run@gpu-cluster-4:~/mvapich2-2.1rc1/examples$ mpirun_rsh -ssh -np 2 gpu-cluster-4 gpu-cluster-4 ./cpi
Process 0 of 2 is on gpu-cluster-4
Process 1 of 2 is on gpu-cluster-4
pi is approximately 3.1415926544231318, Error is 0.0000000008333387
wall clock time = 0.000134I run the cpi example both on gpu-cluster-1 and gpu-cluster-4 using mpiexec, and it worked OK, just like this:
run@gpu-cluster-1:~/mvapich2-2.1rc1/examples$ mpiexec -np 2 -f hostfile ./cpi
Process 0 of 2 is on gpu-cluster-1
Process 1 of 2 is on gpu-cluster-4
pi is approximately 3.1415926544231318, Error is 0.0000000008333387
wall clock time = 0.000352
The content in hostfile is "gpu-cluster-1\ngpu-cluster-4"But, when I run cpi example, using mpirun_rsh, borh on gpu-cluster-1 and gpu-cluster-4, problem came out:
run@gpu-cluster-1:~/mvapich2-2.1rc1/examples$ mpirun_rsh -ssh -np 2 -hostfile hostfile ./cpi Process 1 of 2 is on gpu-cluster-4
-----------------It stuck here, not going on ------------------------
After a long time, I press Ctrl + C, and it present this:
^C[gpu-cluster-1:mpirun_rsh][signal_processor] Caught signal 2, killing job
run@gpu-cluster-1:~/mvapich2-2.1rc1/examples$ [gpu-cluster-4:mpispawn_1][read_size] Unexpected End-Of-File on file descriptor 6. MPI process died?
[gpu-cluster-4:mpispawn_1][read_size] Unexpected End-Of-File on file descriptor 6. MPI process died?
[gpu-cluster-4:mpispawn_1][handle_mt_peer] Error while reading PMI socket. MPI process died?
[gpu-cluster-4:mpispawn_1][report_error] connect() failed: Connection refused (111)
I have been confused for a long time, could you give me some help to resolve this problems?
Here is the code of cpi example:
#include "mpi.h"
#include <stdio.h>
#include <math.h>
double f(double);
double f(double a)
{
return (4.0 / (1.0 + a*a));
}
int main(int argc,char *argv[])
{
int n, myid, numprocs, i;
double PI25DT = 3.141592653589793238462643;
double mypi, pi, h, sum, x;
double startwtime = 0.0, endwtime;
int namelen;
char processor_name[MPI_MAX_PROCESSOR_NAME];
MPI_Init(&argc,&argv);
MPI_Comm_size(MPI_COMM_WORLD,&numprocs);
MPI_Comm_rank(MPI_COMM_WORLD,&myid);
MPI_Get_processor_name(processor_name,&namelen);
fprintf(stdout,"Process %d of %d is on %s\n",
myid, numprocs, processor_name);
fflush(stdout);
n = 10000; /* default # of rectangles */
if (myid == 0)
startwtime = MPI_Wtime();
MPI_Bcast(&n, 1, MPI_INT, 0, MPI_COMM_WORLD);
h = 1.0 / (double) n;
sum = 0.0;
/* A slightly better approach starts from large i and works back */
for (i = myid + 1; i <= n; i += numprocs)
{
x = h * ((double)i - 0.5);
sum += f(x);
}
mypi = h * sum;
MPI_Reduce(&mypi, &pi, 1, MPI_DOUBLE, MPI_SUM, 0, MPI_COMM_WORLD);
if (myid == 0) {
endwtime = MPI_Wtime();
printf("pi is approximately %.16f, Error is %.16f\n",
pi, fabs(pi - PI25DT));
printf("wall clock time = %f\n", endwtime-startwtime);
fflush(stdout);
}
MPI_Finalize();
return 0;
}