I'm trying to create a cluster diagram for an adjacency matrix I've constructed in R. I can get it to render the diagram but I don't know how to modify the neato-specific parameters so the diagram doesn't look completely tangled.
here's what I have so far:
am.graph<-new("graphAM", adjMat=linkadj, edgemode="undirected")
plot(am.graph, "neato")
Between the above commands it seems like you should use the following function but the documentation is too sparse for me to make sense of it