I'm currently testing out the r5r package, which describes its processes as using parallel computation by default. Given the large number of origin-destination points I want to analyze quickly using its detailed_itineraries function, I wanted to test to see whether it could be sped up at all using any of the other parallelization tools in R.
I am trying using this code:
library(r5r)
library(sf)
library(tigris)
library(future.apply)
library(rJava)
library(tidyverse)
r5r_core <- setup_r5(data_path = path, verbose = FALSE)
tracts2 <- tracts(state = "PA", county = "Philadelphia", year=2019)%>%
select(GEOID)%>%
st_centroid()%>%
st_transform("EPSG:4326")%>%
arrange(GEOID)%>%
rename(id = GEOID)%>%
mutate(lon = unlist(map(geometry,1)),
lat = unlist(map(geometry,2)))%>%
st_set_geometry(NULL)%>%
as.data.frame()
mode <- c("WALK", "TRANSIT")
max_walk_time <- 30 # minutes
departure_datetime <- as.POSIXct("14-06-2023 8:30:00",
format = "%d-%m-%Y %H:%M:%S")
plan(multicore)
fn <- function(x, y){
detailed_itineraries(r5r_core = r5r_core,
origins = x,
destinations = y,
mode = mode,
departure_datetime = departure_datetime,
max_walk_time = max_walk_time,
walk_speed = 4.5,
max_trip_duration = 60,
shortest_path = TRUE,
all_to_all = FALSE,
drop_geometry = TRUE,
progress= TRUE)
}
future_mapply(fn, tracts2, tracts2)
And am getting this error:
Error in assign_points_input(origins, "origins") :
'origins' must be either a 'data.frame' or a 'POINT sf'.
What is going wrong here? Alternatively, am I barking up the wrong tree trying to gain any speed this way?
{r5r}
functions cannot be sped up using parallelization from R. We've tested it a few times already, and any parallelization we tried doing in R was less efficient than the current parallelization implemented in Java. To control the number of threads used when routing, please use then_threads
parameter.PS: The error you're seeing results from incorrect
future_mapply()
usage. Under the hood, a data.frame is a list with some additional attributes and methods, so when you pass a data.frame tofuture_mapply()
the function iterates to each one of its columns. Effectively, what you're doing with your code is passingtracts2
's columns todetailed_itineraries()
, nottracts2
itself.