I am trying to automate a process and creating one outer function to run several smaller inner functions but function
that have variable names
as arguments are causing errors:
When I run below function on its own then it works fine:
gapminder <- read.csv("https://raw.githubusercontent.com/swcarpentry/r-novice-gapminder/gh-pages/_episodes_rmd/data/gapminder-FiveYearData.csv")
################ fn_benchmark_country ################
fn_benchmark_country <- function(bench_country = India){
bench_country = enquo(bench_country)
gapminder_benchmarked_wider <- gapminder %>%
select(country, year, gdpPercap) %>%
pivot_wider(names_from = country, values_from = gdpPercap) %>%
arrange(year) %>%
mutate(across(-1, ~ . - !!bench_country))
# Reshaping back to Longer
gapminder_benchmarked_longer <- gapminder_benchmarked_wider %>%
pivot_longer(cols = !year, names_to = "country", values_to = "benchmarked")
# Joining tables
gapminder_joined <- left_join(x = gapminder, y = gapminder_benchmarked_longer, by = c("year","country"))
# converting to factor
gapminder_joined$country <- as.factor(gapminder_joined$country)
return(gapminder_joined)
}
################ ----------------------------- ################
# Calling function
fn_benchmark_country(Vietnam)
country year pop continent lifeExp gdpPercap benchmarked
Afghanistan 1952 8425333 Asia 28.80100 779.4453 232.879565
Afghanistan 1957 9240934 Asia 30.33200 820.8530 230.791034
But when I run this inside an outer function then it gives me error:
fn_run_all <-function(bench_country = India, year_start = 1952, year_end = 2007){
bench_country = bench_country
year_start = year_start
year_end = year_end
fn_benchmark_country(bench_country)
}
fn_run_all()
Error in fn_run_all() : object 'India' not found
If I add enquo
to the argument then I still get error as shown below"
fn_run_all <-function(bench_country = India, year_start = 1952, year_end = 2007){
bench_country = enquo(bench_country)
year_start = year_start
year_end = year_end
fn_benchmark_country(bench_country)
}
fn_run_all()
Error: Problem with `mutate()` input `..1`. x Base operators are not defined for quosures. Do you need to unquote the quosure? # Bad: lhs - myquosure # Good: lhs - !!myquosure i Input `..1` is `across(-1, ~. - bench_country)`.
Not sure how to resolve this, will appreciate any help !!
Adding New Relevant Issue from here
Now getting an error due to last inner function call fn_create_plot()
Its the same type of issue occurring due to the use of bench_country
in creating dynamic subtitle
of the plot but this time I have used {{}}
but still getting issue
fn_run_all <-function(bench_country = India, year_start = 1952, year_end = 2007){
year_start = year_start
year_end = year_end
fn_benchmark_country({{bench_country}})
fn_year_filter(gapminder_joined, year_start, year_end) %>%
fn_create_plot(., year_start, year_end, {{bench_country}})
}
fn_run_all(Vietnam, 1967, 2002)
Error in sprintf("Benchmarked %i in blue line \nFor Countries with pop > 30000000 \n(Chart created by ViSa)", : object 'Vietnam' not found
Function code for reference
################ fn_create_plot ################
fn_create_plot <- function(df, year_start, year_end, bench_country ){
# plotting
ggplot(df) +
geom_vline(xintercept = 0, col = "blue", alpha = 0.5) +
geom_label( label="India - As Benchamrking line", x=0, y="United States",
label.padding = unit(0.55, "lines"), # Rectangle size around label
label.size = 0.35, color = "black") +
geom_segment(aes(x = benchmarked_start, xend = benchmarked_end,
y = country, yend = country,
col = continent), alpha = 0.5, size = 7) +
geom_point(aes(x = benchmarked, y = country, col = continent), size = 9, alpha = .6) +
geom_text(aes(x = benchmarked_start + 8, y = country,
label = paste(country, round(benchmarked_start))),
col = "grey50", hjust = "right") +
geom_text(aes(x = benchmarked_end - 4.0, y = country,
label = round(benchmarked_end)),
col = "grey50", hjust = "left") +
# scale_x_continuous(limits = c(20,85)) +
scale_color_brewer(palette = "Pastel2") +
labs(title = sprintf("GdpPerCapita Differenece with India (Starting point at %i and Ending at %i)",year_start, year_end),
subtitle = sprintf("Benchmarked %i in blue line \nFor Countries with pop > 30000000 \n(Chart created by ViSa)", bench_country),
col = "Continent", x = sprintf("GdpPerCap Difference at %i & %i", year_start, year_end) ) +
# background & theme settings
theme_classic() +
theme(legend.position = "top",
axis.line = element_blank(),
axis.ticks = element_blank(),
axis.text = element_blank()
)
}
################ ----------------------------- ################
When you use
enquo()
you also need to use!!
when you call the variable in question within the function. This works:You can also just substitute
enquo()
and!!
with the tunnel{{ }}
: