I inconsistently get following error when using multidplyr
(ie, for the same data sometimes I get the error, sometimes not):
Error in rs_init(self, private, super, options, wait, wait_timeout) : Could not start R session, timed out
My setting looks like:
list1 <- list()
for (i in 1:500){
while(TRUE){
test1 <- try(df %>%
group_by(id) %>%
recursive_func_c())
if(!is(test1, 'try-error')) break
}
list1[[i]] <- test1
}
Where recursive_func_c
is a function that calls:
cluster <- multidplyr::new_cluster(7)
As far as I understand it correctly, a multidplyr cluster consists of multiple R processes created by callr
. It seems the error message I get comes from the callr
package.
For debugging, I would like to set a longer time out time for callr
within multidplyr
. Is that possible?
Thank you for any hint.
Think this issue was solved here: https://github.com/tidyverse/multidplyr/issues/97
15 seconds is propably too short for my setting.
If you face the same issue, you can try to temporarily change
wait_timeout
ofnew_cluster()
withtrace(new_cluster, edit=TRUE)
(more regarding general function modification can be found here: Modify package function)60 seconds seems to work for me.