I'm trying to create the parameter px
on the holoviews.operation.datashader.spread
operation interactively changeable together with an additional overlay.
The diagram with an IntSlider and the function returned by pn.bind(get_spreaded, px=px_slider) is working as expected when executing with
pn.Column(px_slider, interactive)`.
But with an additional overlay, the line pn.Column(px_slider, interactive * other)
reports TypeError: unsupported operand type(s) for *: 'function' and 'Points'
.
How can I use the *
operator with the function returned from pn.bind(...)
?
Or is this the wrong way doing this? Is there a better and easier solution?
I ran the following code in jupyter lab:
import holoviews as hv
import panel as pn
import numpy as np
from holoviews.operation.datashader import rasterize, spread
import colorcet
import pandas as pd
hv.extension('bokeh')
pn.extension()
hv.opts.defaults(
hv.opts.Path(width=800, height=400),
hv.opts.Image(width=800, height=400)
)
def random_walk(n, f=200):
"""Random walk in a 2D space, smoothed with a filter of length f"""
xs = np.convolve(np.random.normal(0, 0.1, size=n), np.ones(f)/f).cumsum()
ys = np.convolve(np.random.normal(0, 0.1, size=n), np.ones(f)/f).cumsum()
xs += 0.1*np.sin(0.1*np.array(range(n-1+f))) # add wobble on x axis
xs += np.random.normal(0, 0.005, size=n-1+f) # add measurement noise
ys += np.random.normal(0, 0.005, size=n-1+f)
return np.column_stack([xs, ys])
# create a path and plot it
path = hv.Path([random_walk(10000, 30)])
path
# rasterize and show the plot
rasterized = rasterize(path).opts(colorbar=True, cmap=colorcet.fire, cnorm='log')
rasterized
# the callback for getting the spreaded plot
def get_spreaded(px=3, shape='circle'):
return spread(rasterized, px=px, shape=shape)
# show the plot returned from the callback
get_spreaded()
# create the slider for interactively changing the px value
px_slider = pn.widgets.IntSlider(name='Number of pixels to spread on all sides', start=0, end=10, value=3, step=1)
# bind the slider to the callback method
interactive = pn.bind(get_spreaded, px=px_slider)
# show only one plot without any overlay
pn.Column(px_slider, interactive)
# create data for an overlay
df = pd.DataFrame(data={'c1': [1, 2, 3, 4, 5], 'c2': [3, 4, 5, 6, 7]})
other = hv.Points(data=df)
other
# show both plots
pn.Column(px_slider, interactive * other)
The last line results in the following Error message:
#
---------------------------------------------------------------------------
TypeError Traceback (most recent call last)
Cell In[159], line 1
----> 1 pn.Column(px_slider, interactive * other)
TypeError: unsupported operand type(s) for *: 'function' and 'Points'
I would expect, that there is some way to wrap the function and makes it possible to use the *
operator. But I couldn't find a way yet.
Although in this particular case the return value of the function is something that HoloViews could (in principle) overlay with the other plot, HoloViews doesn't know that; the HoloViews
*
operator only knows how to handle HoloViews objects (Elements, HoloMaps, Layouts, and DynamicMaps), not bound Panel functions.You could use a DynamicMap much like you used
pn.bind
, but here HoloViews operations already understand what to do with Panel widgets, so you can simply supply the widget to thespread
operation (or any other operation's parameters):