graphhopper Custom osm.pbf file

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I have a database filled with my own data which I collected. I stored the data in a pgsnapshot databasis after which successfully exported via Osmosis to a .pbf file, osm tagged etc.

After this I give this file to graphhopper to generate the routing files, and have also created the Mapsforge .map file with Osmosis and this displays correctly. However, I can only route on a single track geometry and over two or more, I get the "route between locations cannot be found error". I did the same with a standard OSM pbf file and the routing works perfectly. So the question is, what can possible be different between my custom pbf file and a standard OSM pbf file that causes the routing on my data not to work over more than one track geometry? This happens throughout my data.

Furthermore, my data has been cleaned and snapped at all intersections at a tolerance of 0.00002. So I assume that all the tracks are connected.

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Ian23 On BEST ANSWER

Ok, usging JOSM to validate the data seemed to do the trick.

Thanks for the help.