I have a .config
file containing directory paths for various tools. I want to isolate a single filepath, for example: /mount1/nextflow_dir/
, and for the other tools, I would like to add something as simple as demonstrated in the Python code below:
import os
tool1_fp = os.path.join(main_config, 'tool1')
tool2_fp = os.path.join(main_config, 'tool2')
Is there a way to perform this directory in NextFlow using google language or otherwise, instead of depending on an additional pyhton or bash script?
I was able to fix it using;