Changing Clustering Coefficient in Cytoscape

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If I change any parameter like clustering coefficient, average shortest path length, it is not showing any effect on the visualization of the network. enter image description here

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Scooter Morris On

That is correct. If you want the network to reflect a parameter like that, you need to use an edge-weighted layout and then select that column as the weight. Note that if you manually change the value, you will need to relayout the network.

-- scooter