Bundle ID Mac AppStore and non Mac AppStore

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I'm releasing my Mac app both on the Mac AppStore and from my Online Store. I'm wondering if I should have the same bundle id for both or a different one?

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Sega-Zero On BEST ANSWER

There is nothing bad in the same bundle ids. Sandboxed apps and non-sandboxed are linked to a different paths. If you sign your online store app with Developer ID (which is definitely worth of) and use sandboxing in both distributions - there will be almost no difference.