I'm running GlassFish 3.1.2 behind Apache 2.4.10 web server and mod_jk on CentOS 6 Linux server. I've observed PCI Compliance scans consistently create errors in the GlassFish server.log file, which cause my web app running in GlassFish to become unavailable (file not found). Basically, the web app dies, but the domain continues to run, although it continuously generates errors from that point forward.
Could anyone confirm this is known behavior? If so, are there any known workarounds?
Or, is the only solution to bring my application down for the 1-2 days it takes to run the PCI Compliance scan?
Here are typical errors/warning I see when running such scans (these from GlassFish's server.log file):
[#|2014-11-13T16:09:46.849-0800|WARNING|glassfish3.1.2|org.apache.catalina.connector.Request|_ThreadID=57;_ThreadName=Thread-2;|PWC4011: Unable to set request character encoding to UTF-8 from context , because request parameters have already been read, or ServletRequest.getReader() has already been called|#]
[#|2014-11-14T11:56:40.218-0800|WARNING|glassfish3.1.2|javax.enterprise.resource.corba.ORBUtil|_ThreadID=515;_ThreadName=Thread-2;|IOP00710020: Error in GIOP magic org.omg.CORBA.INTERNAL: WARNING: IOP00710020: Error in GIOP magic vmcid: OMG minor code: 20 completed: Maybe at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:57) at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45) at java.lang.reflect.Constructor.newInstance(Constructor.java:526) at com.sun.corba.ee.spi.orbutil.logex.corba.CorbaExtension.makeException(CorbaExtension.java:248) at com.sun.corba.ee.spi.orbutil.logex.corba.CorbaExtension.makeException(CorbaExtension.java:95) at com.sun.corba.ee.spi.orbutil.logex.WrapperGenerator.handleFullLogging(WrapperGenerator.java:387) at com.sun.corba.ee.spi.orbutil.logex.WrapperGenerator.access$400(WrapperGenerator.java:107) at com.sun.corba.ee.spi.orbutil.logex.WrapperGenerator$2.invoke(WrapperGenerator.java:511) at com.sun.corba.ee.spi.orbutil.proxy.CompositeInvocationHandlerImpl.invoke(CompositeInvocationHandlerImpl.java:99) at com.sun.proxy.$Proxy196.giopMagicError(Unknown Source) at com.sun.corba.ee.impl.protocol.giopmsgheaders.MessageBase.parseGiopHeader(MessageBase.java:201) at com.sun.corba.ee.impl.protocol.MessageParserImpl.parseBytes(MessageParserImpl.java:216) at com.sun.corba.ee.impl.transport.SocketOrChannelConnectionImpl.parseBytesAndDispatchMessages(SocketOrChannelConnectionImpl.java:1619) at com.sun.corba.ee.impl.transport.SocketOrChannelConnectionImpl.doOptimizedReadStrategy(SocketOrChannelConnectionImpl.java:1486) at com.sun.corba.ee.impl.transport.SocketOrChannelConnectionImpl.doWork(SocketOrChannelConnectionImpl.java:1084) at com.sun.corba.ee.impl.orbutil.threadpool.ThreadPoolImpl$WorkerThread.performWork(ThreadPoolImpl.java:497) at com.sun.corba.ee.impl.orbutil.threadpool.ThreadPoolImpl$WorkerThread.run(ThreadPoolImpl.java:540) |#]
[#|2014-11-14T11:58:57.231-0800|SEVERE|glassfish3.1.2|com.sun.grizzly.config.GrizzlyServiceListener|_ThreadID=53;_ThreadName=Thread-2;|GRIZZLY0051: ProcessorTask exception. java.lang.IllegalStateException: Invalid packet magic number: 1603 pos=0 lastValid=166 end=0 at com.sun.grizzly.http.ajp.AjpInputBuffer.readAjpMessageHeader(AjpInputBuffer.java:90) at com.sun.grizzly.http.ajp.AjpProcessorTask.parseRequest(AjpProcessorTask.java:107) at com.sun.grizzly.http.ProcessorTask.doProcess(ProcessorTask.java:706) at com.sun.grizzly.http.ProcessorTask.process(ProcessorTask.java:1045) at com.sun.grizzly.http.DefaultProtocolFilter.execute(DefaultProtocolFilter.java:228) at com.sun.grizzly.DefaultProtocolChain.executeProtocolFilter(DefaultProtocolChain.java:137) at com.sun.grizzly.DefaultProtocolChain.execute(DefaultProtocolChain.java:104) at com.sun.grizzly.DefaultProtocolChain.execute(DefaultProtocolChain.java:90) at com.sun.grizzly.http.HttpProtocolChain.execute(HttpProtocolChain.java:79) at com.sun.grizzly.ProtocolChainContextTask.doCall(ProtocolChainContextTask.java:54) at com.sun.grizzly.SelectionKeyContextTask.call(SelectionKeyContextTask.java:59) at com.sun.grizzly.ContextTask.run(ContextTask.java:71) at com.sun.grizzly.util.AbstractThreadPool$Worker.doWork(AbstractThreadPool.java:532) at com.sun.grizzly.util.AbstractThreadPool$Worker.run(AbstractThreadPool.java:513) at java.lang.Thread.run(Thread.java:724) |#]
[#|2014-11-14T12:03:28.651-0800|SEVERE|glassfish3.1.2|org.apache.jasper.servlet.JspServlet|_ThreadID=532;_ThreadName=Thread-2;|PWC6117: File "/home/glassfish/glassfish3/glassfish/domains/domain1/docroot/login.jsp" not found|#]
[#|2014-11-14T12:03:29.062-0800|SEVERE|glassfish3.1.2|org.apache.jasper.servlet.JspServlet|_ThreadID=533;_ThreadName=Thread-2;|PWC6117: File "/home/glassfish/glassfish3/glassfish/domains/domain1/docroot/spiffymcgee.jsp" not foun d|#]
[#|2014-11-14T12:03:29.634-0800|SEVERE|glassfish3.1.2|com.sun.grizzly.config.GrizzlyServiceListener|_ThreadID=531;_ThreadName=Thread-2;|GRIZZLY0042: Error creating internal request. java.lang.NumberFormatException at com.sun.grizzly.util.buf.Ascii.parseLong(Ascii.java:236) at com.sun.grizzly.util.buf.ByteChunk.getLong(ByteChunk.java:554) at com.sun.grizzly.util.buf.MessageBytes.getLong(MessageBytes.java:715) at com.sun.grizzly.tcp.Request.getContentLengthLong(Request.java:378) at com.sun.grizzly.http.ProcessorTask.prepareRequest(ProcessorTask.java:1457) at com.sun.grizzly.http.ProcessorTask.parseRequest(ProcessorTask.java:947) at com.sun.grizzly.http.ProcessorTask.doProcess(ProcessorTask.java:706) at com.sun.grizzly.http.ProcessorTask.process(ProcessorTask.java:1045) at com.sun.grizzly.http.DefaultProtocolFilter.execute(DefaultProtocolFilter.java:228) at com.sun.grizzly.DefaultProtocolChain.executeProtocolFilter(DefaultProtocolChain.java:137) at com.sun.grizzly.DefaultProtocolChain.execute(DefaultProtocolChain.java:104) at com.sun.grizzly.DefaultProtocolChain.execute(DefaultProtocolChain.java:90) at com.sun.grizzly.http.HttpProtocolChain.execute(HttpProtocolChain.java:79) at com.sun.grizzly.ProtocolChainContextTask.doCall(ProtocolChainContextTask.java:54) at com.sun.grizzly.SelectionKeyContextTask.call(SelectionKeyContextTask.java:59) at com.sun.grizzly.ContextTask.run(ContextTask.java:71) at com.sun.grizzly.util.AbstractThreadPool$Worker.doWork(AbstractThreadPool.java:532) at com.sun.grizzly.util.AbstractThreadPool$Worker.run(AbstractThreadPool.java:513) at java.lang.Thread.run(Thread.java:724) |#]
[#|2014-11-14T12:03:34.250-0800|WARNING|glassfish3.1.2|com.sun.grizzly.config.GrizzlyServiceListener|_ThreadID=62;_ThreadName=Thread-2;|Internal Server error: %. java.io.CharConversionException: EOF at com.sun.grizzly.util.buf.UDecoder.convert(UDecoder.java:140) at com.sun.grizzly.util.buf.UDecoder.convert(UDecoder.java:257) at com.sun.grizzly.util.buf.UDecoder.convert(UDecoder.java:235) at com.sun.grizzly.util.http.HttpRequestURIDecoder.decode(HttpRequestURIDecoder.java:98) at com.sun.enterprise.v3.services.impl.ContainerMapper.lookupHandler(ContainerMapper.java:243) at com.sun.enterprise.v3.services.impl.ContainerMapper.service(ContainerMapper.java:194) at com.sun.grizzly.http.ProcessorTask.invokeAdapter(ProcessorTask.java:849) at com.sun.grizzly.http.ProcessorTask.doProcess(ProcessorTask.java:746) at com.sun.grizzly.http.ProcessorTask.process(ProcessorTask.java:1045) at com.sun.grizzly.http.DefaultProtocolFilter.execute(DefaultProtocolFilter.java:228) at com.sun.grizzly.DefaultProtocolChain.executeProtocolFilter(DefaultProtocolChain.java:137) at com.sun.grizzly.DefaultProtocolChain.execute(DefaultProtocolChain.java:104) at com.sun.grizzly.DefaultProtocolChain.execute(DefaultProtocolChain.java:90) at com.sun.grizzly.http.HttpProtocolChain.execute(HttpProtocolChain.java:79) at com.sun.grizzly.ProtocolChainContextTask.doCall(ProtocolChainContextTask.java:54) at com.sun.grizzly.SelectionKeyContextTask.call(SelectionKeyContextTask.java:59) at com.sun.grizzly.ContextTask.run(ContextTask.java:71) at com.sun.grizzly.util.AbstractThreadPool$Worker.doWork(AbstractThreadPool.java:532) at com.sun.grizzly.util.AbstractThreadPool$Worker.run(AbstractThreadPool.java:513) at java.lang.Thread.run(Thread.java:724) |#]
[#|2014-11-14T12:03:34.427-0800|WARNING|glassfish3.1.2|com.sun.grizzly.config.GrizzlyServiceListener|_ThreadID=57;_ThreadName=Thread-2;|Internal Server error: %server.policy java.io.CharConversionException: isHexDigit at com.sun.grizzly.util.buf.UDecoder.convert(UDecoder.java:145) at com.sun.grizzly.util.buf.UDecoder.convert(UDecoder.java:257) at com.sun.grizzly.util.buf.UDecoder.convert(UDecoder.java:235) at com.sun.grizzly.util.http.HttpRequestURIDecoder.decode(HttpRequestURIDecoder.java:98) at com.sun.enterprise.v3.services.impl.ContainerMapper.lookupHandler(ContainerMapper.java:243) at com.sun.enterprise.v3.services.impl.ContainerMapper.service(ContainerMapper.java:194) at com.sun.grizzly.http.ProcessorTask.invokeAdapter(ProcessorTask.java:849) at com.sun.grizzly.http.ProcessorTask.doProcess(ProcessorTask.java:746) at com.sun.grizzly.http.ProcessorTask.process(ProcessorTask.java:1045) at com.sun.grizzly.http.DefaultProtocolFilter.execute(DefaultProtocolFilter.java:228) at com.sun.grizzly.DefaultProtocolChain.executeProtocolFilter(DefaultProtocolChain.java:137) at com.sun.grizzly.DefaultProtocolChain.execute(DefaultProtocolChain.java:104) at com.sun.grizzly.DefaultProtocolChain.execute(DefaultProtocolChain.java:90) at com.sun.grizzly.http.HttpProtocolChain.execute(HttpProtocolChain.java:79) at com.sun.grizzly.ProtocolChainContextTask.doCall(ProtocolChainContextTask.java:54) at com.sun.grizzly.SelectionKeyContextTask.call(SelectionKeyContextTask.java:59) at com.sun.grizzly.ContextTask.run(ContextTask.java:71) at com.sun.grizzly.util.AbstractThreadPool$Worker.doWork(AbstractThreadPool.java:532) at com.sun.grizzly.util.AbstractThreadPool$Worker.run(AbstractThreadPool.java:513) at java.lang.Thread.run(Thread.java:724) |#]