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Question

Elegantly handle samples with insufficient data in workflow?

score 234 · Answer 1 · 2016-12-20 19:57:28

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Elegantly handle samples with insufficient data in workflow?

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Can SnakeMake be forced to rerun rules when files are missing

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score 160 · Answer 8 · 2017-09-05 22:00:59

Can the output file object be passed to an input function in SnakeMake?

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score 784 · Answer 9 · 2024-11-24 23:20:31

Accepting slightly different inputs to snakemake rule (.fq vs .fq.gz)

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score 1942 · Answer 10 · 2017-09-06 10:13:12

Snakemake touch command

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TechQA.

List Question

Elegantly handle samples with insufficient data in workflow?

Defining Functions for Geany "Filetype"

Using regex in snakemake wildcards

Storing the result of a shell command

Use of argparse in Snakemake script

Any pathway analysis written in snakelike

Can SnakeMake be forced to rerun rules when files are missing

Can the output file object be passed to an input function in SnakeMake?

Accepting slightly different inputs to snakemake rule (.fq vs .fq.gz)

Snakemake touch command

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