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base recalibrator --known-sites argument does not work

score 267 · Answer 1 · 2024-09-21 02:43:47

base recalibrator --known-sites argument does not work

score 279 · Answer 2 · 2024-09-14 02:22:57

Parsing FORMAT and sample value fields from VCF file

score 41 · Answer 3 · 2024-09-10 16:25:13

Troubleshooting GATK Pipeline Error in AWS ParallelCluster Environment and Spark

score 68 · Answer 4 · 2024-09-10 16:25:12

How do I use this python function within the params section of my Snakemake rule?

score 184 · Answer 5 · 2024-09-10 16:26:39

snakemake multiple parameters for multiple input and single output in snakemake. ConbineGVCFs gatk problem

score 112 · Answer 6 · 2024-09-21 14:01:02

What does 'NEGATIVE_TRAIN_SITE' in VQSR mean?

score 24 · Answer 7 · 2024-09-10 16:18:55

GATK Variant Filtration file Anopheles gambiae s.s

score 71 · Answer 8 · 2024-09-10 16:27:01

New: Fatal error compiling: java.lang.NoClassDefFoundError: com/sun/tools/javac/main/OptionName: com.sun.tools.javac.main.OptionName

score 1083 · Answer 9 · 2024-09-10 16:18:53

gatk VariantRecalibrator positional argument error

score 1442 · Answer 10 · 2024-09-10 16:20:41

Combine a directory of GVCF files with gatk CombineGVCFs

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