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Identifying homologous regions across genomes

score 61 · Answer 1 · 2024-02-05T10:33:51.660000

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Identifying homologous regions across genomes

61 views Asked by LORL At 05 February 2024 at 10:33

score 84 · Answer 2 · 2023-10-27T03:22:46.023000

how to use bedtools extracts dna sequence position and length

84 views Asked by iGrace At 27 October 2023 at 03:22

score 248 · Answer 3 · 2023-06-07T01:05:52.190000

ISSUE: malformed BED entry at line 2. Start was greater than end. Exiting. bedtools

248 views Asked by Deep At 07 June 2023 at 01:05

score 236 · Answer 4 · 2023-05-10T18:03:37.927000

Installing Deeptools in R

236 views Asked by erman At 10 May 2023 at 18:03

score 430 · Answer 5 · 2022-12-04T08:53:59.827000

Find rows with overlapping ranges

430 views Asked by Corrector At 04 December 2022 at 08:53

score 168 · Answer 6 · 2022-11-22T22:11:38.557000

bash loop file in one folder against all files in another folder

168 views Asked by clemaster At 22 November 2022 at 22:11

score 420 · Answer 7 · 2022-08-11T06:50:22.180000

RStudio Server from Windows Subsystem for Linux cannot find packages on PATH

420 views Asked by jordimaggi At 11 August 2022 at 06:50

score 840 · Answer 8 · 2022-05-25T17:44:21.120000

How to generate a custom bed file to use for bedtools intersect?

840 views Asked by Cam At 25 May 2022 at 17:44

score 1222 · Answer 9 · 2022-03-05T15:59:07.263000

Problems with bedtools installation

1.2k views Asked by Aurelia Kurtis At 05 March 2022 at 15:59

score 293 · Answer 10 · 2022-02-01T15:38:18.270000

Parse out gene name after bed and vcf intersect

293 views Asked by Maya_Cent At 01 February 2022 at 15:38

score 145 · Answer 11 · 2022-01-13T00:03:41.917000

Using pybedtools with a BEDTools static binary

145 views Asked by EggsandBakins At 13 January 2022 at 00:03

score 86 · Answer 12 · 2021-09-15T08:51:25.800000

bedtools shuffle -excl doesn't seem to warn about consistent naming convention

86 views Asked by user2449089 At 15 September 2021 at 08:51

score 315 · Answer 13 · 2021-06-22T11:22:15.853000

pybedtools bam_to_bed() bedpe

315 views Asked by Matteo At 22 June 2021 at 11:22

score 378 · Answer 14 · 2020-12-17T15:58:19.933000

Use a variable instead of a file for bedtools getfasta BED input?

378 views Asked by Jpike At 17 December 2020 at 15:58

score 1651 · Answer 15 · 2020-11-27T19:19:22.677000

is there an R function similar to bedtools intersect?

1.6k views Asked by pegahT At 27 November 2020 at 19:19

score 504 · Answer 16 · 2020-11-16T14:58:08.447000

converting multiple BAM files to BED files

504 views Asked by user1738234 At 16 November 2020 at 14:58

score 202 · Answer 17 · 2017-06-02T14:36:05.093000

Filter overlapping entries in bed file (2)

202 views Asked by maciek At 02 June 2017 at 14:36

score 455 · Answer 18 · 2017-05-18T13:50:22.437000

bedtools intersect, error reading files read from a directory

455 views Asked by user44552 At 18 May 2017 at 13:50

score 2193 · Answer 19 · 2017-04-15T23:11:56.667000

Filter overlapping entries in bed file

2.1k views Asked by maciek At 15 April 2017 at 23:11

score 199 · Answer 20 · 2015-11-10T16:45:46.983000

Different results with MACS2 when Peakcalling with .bed or .bam

199 views Asked by N. F. At 10 November 2015 at 16:45

TechQA.

List Question

Identifying homologous regions across genomes

how to use bedtools extracts dna sequence position and length

ISSUE: malformed BED entry at line 2. Start was greater than end. Exiting. bedtools

Installing Deeptools in R

Find rows with overlapping ranges

bash loop file in one folder against all files in another folder

RStudio Server from Windows Subsystem for Linux cannot find packages on PATH

How to generate a custom bed file to use for bedtools intersect?

Problems with bedtools installation

Parse out gene name after bed and vcf intersect

Using pybedtools with a BEDTools static binary

bedtools shuffle -excl doesn't seem to warn about consistent naming convention

pybedtools bam_to_bed() bedpe

Use a variable instead of a file for bedtools getfasta BED input?

is there an R function similar to bedtools intersect?

converting multiple BAM files to BED files

Filter overlapping entries in bed file (2)

bedtools intersect, error reading files read from a directory

Filter overlapping entries in bed file

Different results with MACS2 when Peakcalling with .bed or .bam

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